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docs: update and reorganize documentation (#806)

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docs/cli/configuration.md
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@@ -208,6 +208,10 @@ The CLI automatically loads environment variables from an `.env` file. The loadi
- `<profile_name>`: Uses a custom profile. To define a custom profile, create a file named `sandbox-macos-<profile_name>.sb` in your project's `.gemini/` directory (e.g., `my-project/.gemini/sandbox-macos-custom.sb`).
- **`DEBUG` or `DEBUG_MODE`** (often used by underlying libraries or the CLI itself):
- Set to `true` or `1` to enable verbose debug logging, which can be helpful for troubleshooting.
- **`NO_COLOR`**:
- Set to any value to disable all color output in the CLI.
- **`CLI_TITLE`**:
- Set to a string to customize the title of the CLI.
## 3. Command-Line Arguments