feat(core): Align internal agent settings with configs exposed through settings.json (#16458)

packages/core/src/agents/cli-help-agent.ts

@@ -50,14 +50,19 @@ export const CliHelpAgent = (
 
   modelConfig: {
     model: GEMINI_MODEL_ALIAS_FLASH,
-    temp: 0.1,
-    top_p: 0.95,
-    thinkingBudget: -1,
+    generateContentConfig: {
+      temperature: 0.1,
+      topP: 0.95,
+      thinkingConfig: {
+        includeThoughts: true,
+        thinkingBudget: -1,
+      },
+    },
   },
 
   runConfig: {
-    max_time_minutes: 3,
-    max_turns: 10,
+    maxTimeMinutes: 3,
+    maxTurns: 10,
   },
 
   toolConfig: {